C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: structural maintenance of chromosomes 1A, like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000058203 smc1al 7955 + 23:12952070-13009566 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000081016 smc1al-001 12952070-13009566 protein_coding
  ENSDART00000121697 smc1al-002 12952166-12975545 protein_coding
  ENSDART00000126382 smc1al-003 12952090-12965154 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000081016
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000081016 17.157±2.40 22.021±6.16 15.701±2.97 0.684±0.00 6.064±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0051276 IEA chromosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000072501 SMC1A structural maintenance of chromosomes 1A protein_coding Homo_sapiens
ENSMUSG00000041133 Smc1a structural maintenance of chromosomes 1A protein_coding Mus_musculus

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