C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: single stranded DNA binding protein 3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000058237 ssbp3a 7955 - 2:10725784-10818715 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000081072 ssbp3a-001 10725784-10818563 protein_coding
  ENSDART00000097741 ssbp3a-002 10726578-10818715 protein_coding
  ENSDART00000148999 ssbp3a-004 10728086-10734398 protein_coding
  ENSDART00000149719 ssbp3a-003 10747526-10818496 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000081072ENSDART00000097741
Transcript ID Brain Heart Kidney Liver
ENSDART00000081072 1.173±0.26 0.884±0.12 1.898±0.54 0.503±0.00
ENSDART00000097741 N/A 0.670±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006W6 CIL_0006W6_0001 CGP 2:10705328-10818715
CIL_00005A CIL_00005A_0001 CGP 2:10725784-10857700

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003697 IEA single-stranded DNA binding
GO:0005515 IEA protein binding
GO:0048936 IMP peripheral nervous system neuron axonogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000157216 SSBP3 single stranded DNA binding protein 3 protein_coding Homo_sapiens
ENSMUSG00000061887 Ssbp3 single-stranded DNA binding protein 3 protein_coding Mus_musculus

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