C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transforming growth factor-beta-induced factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000059337 tgif1 7955 - 24:9088139-9100890 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000082434 tgif1-001 9088139-9094864 protein_coding
  ENSDART00000149875 tgif1-002 9089419-9092587 protein_coding
  ENSDART00000152378 tgif1-003 9088139-9100890 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000082434ENSDART00000152378
Transcript ID Brain Heart Kidney Liver
ENSDART00000082434 6.436±0.76 5.560±0.00 4.774±0.00 1.484±0.00
ENSDART00000152378 2.530±0.00 12.314±7.13 2.886±0.12 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KX CIL_0006KX_0001 CGP 24:8962741-9100890

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0017015 IMP regulation of transforming growth factor beta receptor signaling pathway
GO:0021797 IGI forebrain anterior/posterior pattern specification
GO:0043565 IEA sequence-specific DNA binding
GO:0048385 IMP regulation of retinoic acid receptor signaling pathway
GO:0048854 IMP brain morphogenesis
GO:0070654 IGI sensory epithelium regeneration
GO:0072091 IMP regulation of stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000177426 TGIF1 TGFB-induced factor homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000047407 Tgif1 TGFB-induced factor homeobox 1 protein_coding Mus_musculus

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