C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntabulin (syntaxin-interacting)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000060112 sybu 7955 + 16:41813327-41834018 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000084381 sybu-001 41813327-41834018 protein_coding
  ENSDART00000121756 sybu-201 41826270-41834018 protein_coding
  ENSDART00000122081 sybu-202 41821467-41833399 protein_coding
  ENSDART00000145364 sybu-002 41813520-41824700 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000084381ENSDART00000121756
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000084381 52.804±6.69 0.063±0.00 N/A N/A 2.770±0.00
ENSDART00000121756 26.357±7.36 0.170±0.01 9.621±6.42 0.824±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0017075 IEA syntaxin-1 binding
GO:0019894 IEA kinesin binding
GO:0048263 IMP determination of dorsal identity
GO:0060828 IMP regulation of canonical Wnt receptor signaling pathway
GO:2000053 IMP regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000147642 SYBU syntabulin (syntaxin-interacting) protein_coding Homo_sapiens
ENSMUSG00000022340 Sybu syntabulin (syntaxin-interacting) protein_coding Mus_musculus

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