C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntabulin (syntaxin-interacting)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022340 Sybu 10090 - 15:44671859-44788063 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090057 Sybu-201 44671859-44788063 protein_coding
  ENSMUST00000110267 Sybu-202 44671859-44752458 protein_coding
  ENSMUST00000110269 Sybu-203 44671859-44788063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090057ENSMUST00000110267ENSMUST00000110269
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090057 N/A N/A N/A 5.290±0.00 0.939±0.00 1.527±0.00 0.076±0.00 N/A 0.152±0.00 0.252±0.10 1.496±0.00 0.042±0.04 0.091±0.00
ENSMUST00000110267 0.752±0.12 0.153±0.07 0.625±0.00 4.873±0.58 1.750±0.17 0.751±0.23 0.324±0.16 0.938±0.70 0.130±0.00 N/A 1.140±0.93 0.113±0.09 0.092±0.01
ENSMUST00000110269 0.677±0.17 0.444±0.08 N/A N/A 0.934±0.00 N/A 0.432±0.07 N/A N/A 0.202±0.02 2.168±0.00 N/A 0.296±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060H CIL_00060H_0002 CGP 15:44619641-44788063
CIL_0005RR CIL_0005RR_0002 CGP 15:44671859-45114934

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0008017 ISO microtubule binding
GO:0016021 IEA integral component of membrane
GO:0017075 IEA syntaxin-1 binding
GO:0019894 IEA kinesin binding
GO:0061178 ISO regulation of insulin secretion involved in cellular response to glucose stimulus
GO:0097433 ISO dense body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060112 sybu syntabulin (syntaxin-interacting) protein_coding Danio_rerio
ENSG00000147642 SYBU syntabulin (syntaxin-interacting) protein_coding Homo_sapiens

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