C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 5b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000060837 trpc5b 7955 + 21:33098564-33177475 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000086115 trpc5b-201 33133004-33176701 protein_coding
  ENSDART00000141770 trpc5b-002 33132960-33142676 nonsense_mediated_decay
  ENSDART00000148115 trpc5b-001 33098564-33177475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000086115ENSDART00000141770ENSDART00000148115
Transcript ID Brain Heart Kidney Liver
ENSDART00000086115 1.614±0.00 N/A 0.482±0.00 0.037±0.00
ENSDART00000141770 0.952±0.00 0.089±0.00 N/A 0.070±0.00
ENSDART00000148115 0.619±0.00 0.033±0.00 0.241±0.00 0.042±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0051536 IEA iron-sulfur cluster binding
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000072315 TRPC5 transient receptor potential cation channel, subfamily C, member 5 protein_coding Homo_sapiens
ENSMUSG00000041710 Trpc5 transient receptor potential cation channel, subfamily C, member 5 protein_coding Mus_musculus

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