C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072315 TRPC5 9606 - X:111774315-112082776 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262839 TRPC5-001 111774315-112082776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000262839
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000262839 0.004±0.00 0.004±0.00 1.241±0.72 0.026±0.02 0.007±0.00 0.306±0.30 0.216±0.00 0.113±0.00 0.089±0.09 0.009±0.00 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A4 CIL_0007A4_0001 CGP X:111774315-112457112

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 IDA calcium channel activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0006816 TAS calcium ion transport
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0015279 TAS store-operated calcium channel activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034220 TAS ion transmembrane transport
GO:0034704 IDA calcium channel complex
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport
GO:0070679 IEA inositol 1,4,5 trisphosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060837 trpc5b transient receptor potential cation channel, subfamily C, member 5b protein_coding Danio_rerio
ENSDARG00000070504 trpc5a transient receptor potential cation channel, subfamily C, member 5a protein_coding Danio_rerio
ENSMUSG00000041710 Trpc5 transient receptor potential cation channel, subfamily C, member 5 protein_coding Mus_musculus

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