C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (sem
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061471 sema5ba 7955 - 9:38528660-38689365 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000087663 sema5ba-201 38528660-38689365 protein_coding
  ENSDART00000138345 sema5ba-001 38533743-38666101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087663
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087663 3.862±0.00 0.686±0.38 0.604±0.08 0.287±0.00 1.448±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BK CIL_0005BK_0001 CGP 9:38419282-38689365
CIL_000074 CIL_000074_0001 CGP 9:38528660-38892659

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000082684 SEMA5B sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (sem protein_coding Homo_sapiens
ENSMUSG00000052133 Sema5b sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (sem protein_coding Mus_musculus

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