C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000061656 ptpdc1 7955 - 11:28388117-28414501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000088177 ptpdc1-001 28388117-28414501 protein_coding
  ENSDART00000137731 ptpdc1-002 28398353-28414433 processed_transcript
  ENSDART00000141320 ptpdc1-003 28397161-28414490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000088177ENSDART00000137731
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000088177 3.031±1.65 1.550±0.86 1.260±0.25 0.091±0.00 0.392±0.00
ENSDART00000137731 N/A 0.735±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WB CIL_0000WB_0001 CGP 11:28388117-28422559

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000158079 PTPDC1 protein tyrosine phosphatase domain containing 1 protein_coding Homo_sapiens
ENSMUSG00000038042 Ptpdc1 protein tyrosine phosphatase domain containing 1 protein_coding Mus_musculus

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