C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000WB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061656-ENSDARG00000007407 CGP 7955 11:28388117-28422559
GeneTranscriptPositionBiotype
ENSDARG00000007407 (barx1)
BarH-like homeobox 1 		ENSDART00000023889 (barx1-001) 28419933-28422559 protein_coding
ENSDARG00000061656 (ptpdc1)
protein tyrosine phosphatase domain containing 1 		ENSDART00000088177 (ptpdc1-001) 28388117-28414501 protein_coding
ENSDART00000137731 (ptpdc1-002) 28398353-28414433 processed_transcript
ENSDART00000141320 (ptpdc1-003) 28397161-28414490 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000WB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038042-ENSMUSG00000021381 CGP 10090 13:48577873-48666507
GeneTranscriptPositionBiotype
ENSMUSG00000021381 (Barx1)
BarH-like homeobox 1 		ENSMUST00000021813 (Barx1-001) 48662998-48666507 protein_coding
ENSMUSG00000038042 (Ptpdc1)
protein tyrosine phosphatase domain containing 1 		ENSMUST00000035824 (Ptpdc1-201) 48577873-48625573 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WB_0001ENSDARG00000007407ENSDART00000023889ENSDARG00000061656ENSDART00000088177ENSDART00000137731ENSDART00000141320CIL_0000WB_0002ENSMUSG00000021381ENSMUST00000021813ENSMUSG00000038042ENSMUST00000035824
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WB_0001ENSDARG00000007407ENSDART00000023889ENSDARG00000061656ENSDART00000088177ENSDART00000137731CIL_0000WB_0002ENSMUSG00000021381ENSMUST00000021813ENSMUSG00000038042ENSMUST00000035824
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007407 ENSDART00000023889 N/A N/A N/A N/A N/A N/A 0.042±0.00 0.409±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000061656 ENSDART00000088177 N/A N/A N/A 3.031±1.65 N/A N/A 1.550±0.86 1.260±0.25 0.091±0.00 N/A 0.392±0.00 N/A N/A N/A
ENSDART00000137731 N/A N/A N/A N/A N/A N/A 0.735±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021381 ENSMUST00000021813 N/A N/A 0.008±0.00 0.111±0.06 N/A 0.029±0.01 0.069±0.01 N/A 0.507±0.28 0.075±0.03 N/A 0.073±0.03 1.653±1.05 0.104±0.06
ENSMUSG00000038042 ENSMUST00000035824 1.952±0.82 1.310±0.48 1.752±0.60 2.082±0.32 0.904±0.49 0.777±0.17 0.687±0.22 3.632±0.66 0.168±0.10 1.762±0.37 0.960±0.20 1.429±0.49 1.066±0.59 30.638±17.88

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