C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PAX3 and PAX7 binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000062361 PAXBP1 7955 + 10:24853213-24873742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000090096 PAXBP1-201 24853292-24873187 protein_coding
  ENSDART00000109663 PAXBP1-202 24853213-24867088 protein_coding
  ENSDART00000139332 PAXBP1-004 24858125-24866635 nonsense_mediated_decay
  ENSDART00000139850 PAXBP1-002 24853213-24873742 protein_coding
  ENSDART00000140572 PAXBP1-001 24853213-24867089 protein_coding
  ENSDART00000145973 PAXBP1-005 24860325-24866922 retained_intron
  ENSDART00000147816 PAXBP1-003 24853427-24873554 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000090096ENSDART00000139850ENSDART00000147816
Transcript ID Brain Heart Kidney Liver
ENSDART00000090096 N/A 2.942±0.00 N/A 0.748±0.00
ENSDART00000139850 7.286±0.15 N/A 4.880±0.39 0.635±0.00
ENSDART00000147816 34.164±2.42 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000159086 PAXBP1 PAX3 and PAX7 binding protein 1 protein_coding Homo_sapiens
ENSMUSG00000022974 Paxbp1 PAX3 and PAX7 binding protein 1 protein_coding Mus_musculus

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