C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000062720 pcdh1a 7955 - 10:20998371-21135264 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000091004 pcdh1a-201 20998371-21128021 protein_coding
  ENSDART00000134692 pcdh1a-002 21121862-21124613 processed_transcript
  ENSDART00000139733 pcdh1a-001 21001569-21135264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000091004ENSDART00000139733
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000091004 6.268±3.11 0.009±0.00 0.102±0.00 N/A 0.876±0.00
ENSDART00000139733 N/A 0.015±0.00 0.019±0.00 0.029±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000156453 PCDH1 protocadherin 1 protein_coding Homo_sapiens
ENSMUSG00000051375 Pcdh1 protocadherin 1 protein_coding Mus_musculus

Loading