C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate receptor, ionotropic, kainate 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069139 grik1a 7955 - 10:26037453-26205077 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000007778 grik1a-201 26037776-26195990 protein_coding
  ENSDART00000134215 grik1a-003 26098650-26205077 protein_coding
  ENSDART00000136989 grik1a-004 26037455-26044960 processed_transcript
  ENSDART00000140023 grik1a-005 26037455-26044942 processed_transcript
  ENSDART00000147089 grik1a-001 26037453-26196181 protein_coding
  ENSDART00000147876 grik1a-002 26158118-26205059 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000007778ENSDART00000136989ENSDART00000140023ENSDART00000147089
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000007778 N/A 0.258±0.15 N/A 0.098±0.00 N/A
ENSDART00000136989 2.615±0.00 1.391±1.09 75.912±2.06 N/A N/A
ENSDART00000140023 N/A N/A 3.304±0.00 N/A N/A
ENSDART00000147089 1.588±0.99 0.090±0.00 0.620±0.00 0.104±0.00 0.231±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005215 IEA transporter activity
GO:0005216 IEA ion channel activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171189 GRIK1 glutamate receptor, ionotropic, kainate 1 protein_coding Homo_sapiens
ENSMUSG00000022935 Grik1 glutamate receptor, ionotropic, kainate 1 protein_coding Mus_musculus

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