C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamate receptor, ionotropic, kainate 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171189 GRIK1 9606 - 21:29536933-29940033 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309434 GRIK1-201 29553558-29694064 protein_coding
  ENST00000327783 GRIK1-004 29536933-29939532 protein_coding
  ENST00000389124 GRIK1-005 29537706-29939532 protein_coding
  ENST00000389125 GRIK1-001 29536933-29939625 protein_coding
  ENST00000399907 GRIK1-002 29553252-29939912 protein_coding
  ENST00000399909 GRIK1-008 29553252-29939912 protein_coding
  ENST00000399913 GRIK1-006 29536933-29939674 protein_coding
  ENST00000399914 GRIK1-003 29536933-29940022 protein_coding
  ENST00000472429 GRIK1-007 29598794-29940033 processed_transcript
  ENST00000535441 GRIK1-202 29536935-29694064 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000389125ENST00000399913
Transcript ID Brain
ENST00000389125 2.348±0.00
ENST00000399913 2.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DA CIL_0003DA_0001 CGP 21:29077471-29630751
CIL_000317 CIL_000317_0001 CGP 21:29194071-29940033
CIL_00031A CIL_00031A_0001 CGP 21:29536933-30166756

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0007215 TAS glutamate receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007399 TAS nervous system development
GO:0007417 TAS central nervous system development
GO:0014054 IEA positive regulation of gamma-aminobutyric acid secretion
GO:0014069 IEA postsynaptic density
GO:0015277 IDA kainate selective glutamate receptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0030534 IEA adult behavior
GO:0032230 IEA positive regulation of synaptic transmission, GABAergic
GO:0032983 IBA kainate selective glutamate receptor complex
GO:0034220 IEA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0042391 IEA regulation of membrane potential
GO:0042734 IBA presynaptic membrane
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:0048266 IEA behavioral response to pain
GO:0051899 IEA membrane depolarization
GO:0051966 TAS regulation of synaptic transmission, glutamatergic
GO:0051967 IEA negative regulation of synaptic transmission, glutamatergic
GO:0060079 IEA regulation of excitatory postsynaptic membrane potential
GO:0060080 IEA regulation of inhibitory postsynaptic membrane potential
GO:0097481 IEA neuronal postsynaptic density

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040627 GRIK1 (1 of 2) glutamate receptor, ionotropic, kainate 1 protein_coding Danio_rerio
ENSDARG00000069139 grik1a glutamate receptor, ionotropic, kainate 1a protein_coding Danio_rerio
ENSMUSG00000022935 Grik1 glutamate receptor, ionotropic, kainate 1 protein_coding Mus_musculus

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