C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GA-binding protein transcription factor, alpha subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069289 gabpa 7955 + 9:35985817-35996821 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000100700 gabpa-002 35986032-35996821 protein_coding
  ENSDART00000100701 gabpa-001 35985817-35996821 protein_coding
  ENSDART00000132631 gabpa-004 35989151-35993618 processed_transcript
  ENSDART00000140110 gabpa-003 35987051-35989497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000100700ENSDART00000100701ENSDART00000140110
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000100700 0.783±0.04 N/A 1.211±0.00 0.340±0.00 N/A
ENSDART00000100701 5.734±0.59 5.889±0.04 3.023±0.00 1.210±0.00 2.480±0.00
ENSDART00000140110 0.871±0.00 1.777±0.49 1.154±0.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MM CIL_0000MM_0001 CGP 9:35985817-36041081

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000154727 GABPA GA binding protein transcription factor, alpha subunit 60kDa protein_coding Homo_sapiens
ENSMUSG00000008976 Gabpa GA repeat binding protein, alpha protein_coding Mus_musculus

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