C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XVII, alpha 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069415 col17a1a 7955 + 1:50074734-50112253 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000101004 col17a1a-201 50083794-50111387 protein_coding
  ENSDART00000142957 col17a1a-001 50074734-50112253 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000101004ENSDART00000142957
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000101004 N/A 0.146±0.00 0.161±0.00 0.071±0.00 0.028±0.00
ENSDART00000142957 0.160±0.06 0.026±0.00 0.054±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008544 IMP epidermis development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000065618 COL17A1 collagen, type XVII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000025064 Col17a1 collagen, type XVII, alpha 1 protein_coding Mus_musculus

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