C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tRNA-yW synthesizing protein 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069672 tyw5 7955 - 9:25149620-25154200 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000101571 tyw5-001 25149620-25154200 protein_coding
  ENSDART00000140808 tyw5-003 25150252-25154001 processed_transcript
  ENSDART00000140967 tyw5-002 25150719-25154000 retained_intron
  ENSDART00000145602 tyw5-004 25152064-25153718 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000101571ENSDART00000140808ENSDART00000140967
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000101571 N/A 1.927±0.04 3.232±0.00 0.448±0.00 0.503±0.00
ENSDART00000140808 1.839±0.00 N/A N/A 0.168±0.00 N/A
ENSDART00000140967 N/A 1.494±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JI CIL_0000JI_0001 CGP 9:25149620-25157276

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000162971 TYW5 tRNA-yW synthesizing protein 5 protein_coding Homo_sapiens
ENSMUSG00000048495 Tyw5 tRNA-yW synthesizing protein 5 protein_coding Mus_musculus

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