C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, alpha 6b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000069946 itga6b 7955 + 1:30075422-30120963 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102210 itga6b-001 30075422-30120963 protein_coding
  ENSDART00000148844 itga6b-004 30113497-30120107 nonsense_mediated_decay
  ENSDART00000148968 itga6b-003 30111172-30120035 protein_coding
  ENSDART00000150169 itga6b-002 30110672-30111439 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102210ENSDART00000148968
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102210 1.596±0.21 0.454±0.00 3.095±0.83 0.013±0.00 N/A
ENSDART00000148968 1.229±0.00 2.609±0.66 4.271±0.00 N/A 3.078±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000091409 ITGA6 integrin, alpha 6 protein_coding Homo_sapiens
ENSMUSG00000027111 Itga6 integrin alpha 6 protein_coding Mus_musculus

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