C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin protein ligase E3 component n-recognin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000070164 ubr2 7955 - 13:2953084-3011326 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102748 ubr2-001 2953084-2981404 protein_coding
  ENSDART00000108517 ubr2-201 2953085-2971362 protein_coding
  ENSDART00000114040 ubr2-202 2953873-3011326 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102748ENSDART00000108517ENSDART00000114040
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102748 N/A N/A N/A 0.233±0.00 1.067±0.00
ENSDART00000108517 3.113±0.00 2.923±3.38 4.023±1.17 1.213±0.00 3.041±0.00
ENSDART00000114040 N/A N/A N/A 0.460±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UG CIL_0006UG_0001 CGP 13:2942181-3011326

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0008270 IEA zinc ion binding
GO:0030163 IEA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000024048 UBR2 ubiquitin protein ligase E3 component n-recognin 2 protein_coding Homo_sapiens
ENSMUSG00000023977 Ubr2 ubiquitin protein ligase E3 component n-recognin 2 protein_coding Mus_musculus

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