C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin protein ligase E3 component n-recognin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000024048 UBR2 9606 + 6:42564062-42693504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372899 UBR2-001 42564062-42693504 protein_coding
  ENST00000372901 UBR2-002 42564062-42693504 protein_coding
  ENST00000372903 UBR2-003 42564062-42620351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372899ENST00000372901
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372899 0.993±0.00 0.944±0.00 0.530±0.00 0.443±0.00 1.134±0.00 2.017±0.71 0.916±0.25 2.089±0.08 N/A 0.849±0.00 0.958±0.00 1.798±0.35 0.295±0.00 0.645±0.00
ENST00000372901 4.030±0.00 4.471±0.00 N/A 2.445±0.41 4.959±1.22 1.954±0.34 3.036±1.72 3.926±0.47 2.950±0.36 4.623±1.03 5.393±1.82 3.040±0.21 3.008±1.20 2.988±1.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000785 IEA chromatin
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005886 IDA plasma membrane
GO:0006342 ISS chromatin silencing
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007141 IEA male meiosis I
GO:0007283 IEA spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0030163 IEA protein catabolic process
GO:0032007 IMP negative regulation of TOR signaling
GO:0033522 ISS histone H2A ubiquitination
GO:0070728 IDA leucine binding
GO:0071233 IDA cellular response to leucine

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070164 ubr2 ubiquitin protein ligase E3 component n-recognin 2 protein_coding Danio_rerio
ENSMUSG00000023977 Ubr2 ubiquitin protein ligase E3 component n-recognin 2 protein_coding Mus_musculus

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