C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ChaC, cation transport regulator-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000070426 chac1 7955 + 20:28296499-28299069 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000103330 chac1-001 28296499-28299069 protein_coding
  ENSDART00000153319 chac1-002 28296552-28297468 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000103330ENSDART00000153319
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000103330 205.379±46.75 867.906±671.15 227.430±90.32 352.390±0.00 1048.460±0.00
ENSDART00000153319 95.606±0.00 327.349±0.00 101.794±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IN CIL_0005IN_0001 CGP 20:28274771-28299069
CIL_0005IM CIL_0005IM_0001 CGP 20:28296499-28381985

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005112 ISS Notch binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0005829 IEA cytosol
GO:0006915 IEA apoptotic process
GO:0006986 IEA response to unfolded protein
GO:0007219 IEA Notch signaling pathway
GO:0007399 IEA nervous system development
GO:0010955 ISS negative regulation of protein processing
GO:0022008 ISS neurogenesis
GO:0045746 ISS negative regulation of Notch signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000128965 CHAC1 ChaC, cation transport regulator homolog 1 (E. coli) protein_coding Homo_sapiens
ENSMUSG00000027313 Chac1 ChaC, cation transport regulator 1 protein_coding Mus_musculus

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