C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ChaC, cation transport regulator homolog 1 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128965 CHAC1 9606 + 15:40952962-40956519 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000444189 CHAC1-003 40952962-40955822 protein_coding
  ENST00000446533 CHAC1-001 40953149-40956519 protein_coding
  ENST00000487220 CHAC1-002 40954206-40956167 protein_coding
  ENST00000617768 CHAC1-201 40953438-40956519 protein_coding
  ENST00000617961 CHAC1-004 40953493-40956512 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444189ENST00000446533ENST00000487220ENST00000617768ENST00000617961
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444189 N/A N/A N/A 0.113±0.00 N/A 0.038±0.00 0.075±0.00 0.051±0.00 N/A N/A N/A N/A N/A
ENST00000446533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.00 N/A
ENST00000487220 N/A 0.246±0.00 N/A 0.470±0.14 N/A 0.239±0.00 N/A N/A N/A N/A 0.995±0.00 0.575±0.00 N/A
ENST00000617768 N/A 0.598±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.440±1.57 N/A 0.798±0.00
ENST00000617961 0.348±0.00 N/A 3.545±0.00 N/A 0.378±0.08 0.604±0.00 3.229±0.00 0.169±0.00 1.553±1.34 10.411±6.66 9.243±9.58 0.574±0.29 0.557±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IN CIL_0005IN_0002 CGP 15:40929340-40956519
CIL_0005IM CIL_0005IM_0002 CGP 15:40952962-41116354

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005112 ISS Notch binding
GO:0005515 IPI protein binding
GO:0005802 ISS trans-Golgi network
GO:0005829 IDA cytosol
GO:0006986 IEA response to unfolded protein
GO:0007219 IEA Notch signaling pathway
GO:0010955 IMP negative regulation of protein processing
GO:0022008 ISS neurogenesis
GO:0045746 IMP negative regulation of Notch signaling pathway
GO:0070059 IMP intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070426 chac1 ChaC, cation transport regulator-like 1 protein_coding Danio_rerio
ENSMUSG00000027313 Chac1 ChaC, cation transport regulator 1 protein_coding Mus_musculus

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