C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting protein 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000070433 vps18 7955 - 20:28383876-28391181 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000103352 vps18-001 28383876-28391181 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000103352
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000103352 7.130±3.48 3.393±2.09 10.766±2.46 0.467±0.00 1.359±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005622 IMP intracellular
GO:0005764 IEA lysosome
GO:0005765 IEA lysosomal membrane
GO:0005768 IEA endosome
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0007275 IEA multicellular organismal development
GO:0007634 IMP optokinetic behavior
GO:0008270 IEA zinc ion binding
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0015721 IMP bile acid and bile salt transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0031902 IEA late endosome membrane
GO:0043485 IMP endosome to pigment granule transport
GO:0045176 IMP apical protein localization
GO:0046872 IEA metal ion binding
GO:0048069 IMP eye pigmentation
GO:0048757 IMP pigment granule maturation
GO:0060036 IMP notochord cell vacuolation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000104142 VPS18 vacuolar protein sorting 18 homolog (S. cerevisiae) protein_coding Homo_sapiens
ENSMUSG00000034216 Vps18 vacuolar protein sorting 18 (yeast) protein_coding Mus_musculus

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