C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alkB, alkylation repair homolog 1 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071164 alkbh1 7955 + 17:17595132-17605345 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105013 alkbh1-001 17595132-17605345 protein_coding
  ENSDART00000138189 alkbh1-002 17595132-17605118 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000105013ENSDART00000138189
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000105013 3.691±2.76 0.731±0.44 5.316±0.00 0.429±0.00 1.434±0.00
ENSDART00000138189 1.164±0.34 0.434±0.00 0.500±0.12 0.434±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016491 IEA oxidoreductase activity
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100601 ALKBH1 alkB, alkylation repair homolog 1 (E. coli) protein_coding Homo_sapiens
ENSMUSG00000079036 Alkbh1 alkB, alkylation repair homolog 1 (E. coli) protein_coding Mus_musculus

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