C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: finTRIM family, member 58
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000071238 ftr58 7955 - 23:6967960-6977453 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000055085 ftr58-002 6967960-6977453 retained_intron
  ENSDART00000056426 ftr58-001 6967960-6977437 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000055085ENSDART00000056426
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000055085 0.092±0.00 N/A 1.056±0.02 0.023±0.00 0.069±0.00
ENSDART00000056426 0.133±0.02 0.099±0.00 0.473±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132481 TRIM47 tripartite motif containing 47 protein_coding Homo_sapiens
ENSMUSG00000020773 Trim47 tripartite motif-containing 47 protein_coding Mus_musculus

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