C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: finTRIM family, member 57
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000074360 ftr57 7955 + 23:5786093-5793448 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000112220 ftr57-201 5786107-5793448 protein_coding
  ENSDART00000134527 ftr57-001 5786093-5793011 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000112220ENSDART00000134527
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000112220 0.148±0.08 0.337±0.11 N/A 0.020±0.00 0.034±0.00
ENSDART00000134527 0.038±0.02 N/A 0.355±0.00 0.005±0.00 0.005±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132481 TRIM47 tripartite motif containing 47 protein_coding Homo_sapiens
ENSMUSG00000020773 Trim47 tripartite motif-containing 47 protein_coding Mus_musculus

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