C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal transducer and activator of transcription 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000076182 stat1b 7955 + 9:42292016-42320232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000000280 stat1b-201 42292994-42320231 protein_coding
  ENSDART00000114822 stat1b-202 42292016-42300856 protein_coding
  ENSDART00000141792 stat1b-002 42297143-42300613 protein_coding
  ENSDART00000145312 stat1b-004 42313811-42319551 retained_intron
  ENSDART00000145674 stat1b-001 42292017-42320232 protein_coding
  ENSDART00000148337 stat1b-003 42311284-42313915 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000000280ENSDART00000114822ENSDART00000145674
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000000280 1.623±0.75 9.046±3.31 4.009±0.64 0.034±0.00 N/A
ENSDART00000114822 0.656±0.10 N/A N/A 0.043±0.00 N/A
ENSDART00000145674 0.535±0.00 2.733±1.26 6.101±0.00 N/A 0.761±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AL CIL_0002AL_0001 CGP 9:42229861-42320232
CIL_0002SJ CIL_0002SJ_0002 CGP 9:42292016-42424366

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction
GO:0030097 IMP hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115415 STAT1 signal transducer and activator of transcription 1, 91kDa protein_coding Homo_sapiens
ENSMUSG00000026104 Stat1 signal transducer and activator of transcription 1 protein_coding Mus_musculus

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