C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002AL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028731-ENSDARG00000076182 CGP 7955 9:42229861-42320232
GeneTranscriptPositionBiotype
ENSDARG00000040730 (wdr75)
WD repeat domain 75 		ENSDART00000059667 (wdr75-001) 42193201-42226939 protein_coding
ENSDART00000136886 (wdr75-002) 42195491-42201237 retained_intron
ENSDART00000142889 (wdr75-004) 42224335-42230015 processed_transcript
ENSDART00000145830 (wdr75-003) 42211650-42218214 retained_intron
ENSDARG00000076182 (stat1b)
signal transducer and activator of transcription 1b 		ENSDART00000000280 (stat1b-201) 42292994-42320231 protein_coding
ENSDART00000114822 (stat1b-202) 42292016-42300856 protein_coding
ENSDART00000141792 (stat1b-002) 42297143-42300613 protein_coding
ENSDART00000145312 (stat1b-004) 42313811-42319551 retained_intron
ENSDART00000145674 (stat1b-001) 42292017-42320232 protein_coding
ENSDART00000148337 (stat1b-003) 42311284-42313915 retained_intron
CIL_0002AL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062939-ENSMUSG00000026104 CGP 10090 1:51987148-52161865
GeneTranscriptPositionBiotype
ENSMUSG00000026104 (Stat1)
signal transducer and activator of transcription 1 		ENSMUST00000070968 (Stat1-001) 52119455-52161865 protein_coding
ENSMUST00000185743 (Stat1-005) 52119572-52137852 retained_intron
ENSMUST00000186057 (Stat1-009) 52119624-52160730 protein_coding
ENSMUST00000186186 (Stat1-013) 52119559-52120394 retained_intron
ENSMUST00000186574 (Stat1-004) 52119440-52155412 protein_coding
ENSMUST00000186857 (Stat1-006) 52119492-52161007 protein_coding
ENSMUST00000188681 (Stat1-012) 52119498-52132633 protein_coding
ENSMUST00000189075 (Stat1-014) 52150104-52152399 retained_intron
ENSMUST00000189244 (Stat1-010) 52150258-52161863 protein_coding
ENSMUST00000189336 (Stat1-015) 52152253-52159560 nonsense_mediated_decay
ENSMUST00000189347 (Stat1-008) 52119549-52155331 protein_coding
ENSMUST00000191435 (Stat1-007) 52119490-52155412 protein_coding
ENSMUSG00000062939 (Stat4)
signal transducer and activator of transcription 4 		ENSMUST00000027277 (Stat4-002) 52008243-52107184 protein_coding
ENSMUST00000168302 (Stat4-001) 51987148-52107189 protein_coding
ENSMUST00000187053 (Stat4-003) 52008626-52072444 retained_intron
ENSMUST00000187554 (Stat4-005) 52105449-52107188 retained_intron
ENSMUSG00000078291 (Gm3940)
predicted gene 3940 		ENSMUST00000105087 (Gm3940-001) 52090635-52091066 processed_pseudogene
ENSMUSG00000099569 (RP24-194N4.5)
predicted gene, 18301 		ENSMUST00000185261 (RP24-194N4.5-001) 52134443-52135330 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AL_0001ENSDARG00000040730ENSDART00000059667ENSDART00000136886ENSDART00000142889ENSDART00000145830ENSDARG00000076182ENSDART00000000280ENSDART00000114822ENSDART00000141792ENSDART00000145312ENSDART00000145674ENSDART00000148337CIL_0002AL_0002ENSMUSG00000026104ENSMUST00000070968ENSMUST00000185743ENSMUST00000186057ENSMUST00000186186ENSMUST00000186574ENSMUST00000186857ENSMUST00000188681ENSMUST00000189075ENSMUST00000189244ENSMUST00000189336ENSMUST00000189347ENSMUST00000191435ENSMUSG00000062939ENSMUST00000027277ENSMUST00000168302ENSMUST00000187053ENSMUST00000187554ENSMUSG00000078291ENSMUST00000105087ENSMUSG00000099569ENSMUST00000185261
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AL_0001ENSDARG00000040730ENSDART00000059667ENSDART00000145830ENSDARG00000076182ENSDART00000000280ENSDART00000114822ENSDART00000145674CIL_0002AL_0002ENSMUSG00000026104ENSMUST00000070968ENSMUST00000186057ENSMUST00000186574ENSMUST00000186857ENSMUST00000188681ENSMUST00000189336ENSMUST00000189347ENSMUSG00000062939ENSMUST00000027277ENSMUST00000168302ENSMUSG00000078291ENSMUST00000105087ENSMUSG00000099569ENSMUST00000185261
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040730 ENSDART00000059667 N/A N/A N/A 3.625±2.55 N/A N/A 6.264±0.78 16.307±0.00 3.843±0.00 N/A 3.069±0.00 N/A N/A N/A
ENSDART00000136886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145830 N/A N/A N/A N/A N/A N/A 15.441±1.16 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076182 ENSDART00000000280 N/A N/A N/A 1.623±0.75 N/A N/A 9.046±3.31 4.009±0.64 0.034±0.00 N/A N/A N/A N/A N/A
ENSDART00000114822 N/A N/A N/A 0.656±0.10 N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A
ENSDART00000141792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145674 N/A N/A N/A 0.535±0.00 N/A N/A 2.733±1.26 6.101±0.00 N/A N/A 0.761±0.00 N/A N/A N/A
ENSDART00000148337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026104 ENSMUST00000070968 N/A 6.087±0.02 N/A 0.315±0.00 N/A 1.453±0.11 N/A N/A N/A N/A N/A 4.014±0.28 N/A N/A
ENSMUST00000185743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186057 N/A N/A N/A 0.828±0.00 N/A N/A N/A N/A N/A N/A 1.240±0.33 5.694±0.02 4.169±1.88 N/A
ENSMUST00000186186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186574 10.020±0.53 19.923±2.61 9.577±3.12 0.959±0.03 18.289±3.21 4.050±0.64 2.831±0.83 6.102±0.88 6.635±2.84 5.916±1.54 0.959±0.40 9.680±2.46 6.015±1.88 N/A
ENSMUST00000186857 15.913±0.96 12.288±1.37 17.768±3.64 1.499±0.58 21.917±2.78 3.706±1.15 5.806±0.31 8.203±1.07 6.921±2.12 14.219±1.47 2.504±0.76 10.669±3.24 7.128±2.88 N/A
ENSMUST00000188681 19.708±1.72 38.041±3.71 N/A N/A 33.515±6.60 7.608±1.65 N/A 6.087±0.00 10.428±2.72 16.547±2.12 N/A 25.939±9.25 N/A N/A
ENSMUST00000189075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189336 N/A N/A N/A 3.192±0.00 N/A N/A N/A N/A N/A N/A N/A 12.558±0.00 7.644±0.00 N/A
ENSMUST00000189347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.277±0.00 N/A N/A
ENSMUST00000191435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062939 ENSMUST00000027277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.410±7.87
ENSMUST00000168302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.068±9.60
ENSMUST00000187053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078291 ENSMUST00000105087 0.217±0.05 N/A 0.038±0.00 0.074±0.03 N/A N/A N/A 0.114±0.00 0.160±0.09 N/A N/A 0.242±0.00 0.145±0.13 0.878±0.47
ENSMUSG00000099569 ENSMUST00000185261 0.421±0.30 0.349±0.17 0.142±0.03 0.062±0.01 0.884±0.50 0.103±0.00 0.141±0.06 0.107±0.05 0.212±0.15 0.346±0.00 N/A 0.366±0.28 0.082±0.03 0.091±0.00

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