C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XXVIII, alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000076321 COL28A1 (2 of 4) 7955 - 9:49284947-49358180 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000115121 COL28A1 (2 of 4)-201 49284953-49353261 protein_coding
  ENSDART00000134185 COL28A1 (2 of 4)-002 49329777-49358180 nonsense_mediated_decay
  ENSDART00000140185 COL28A1 (2 of 4)-001 49284947-49358180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000115121ENSDART00000134185
Transcript ID Brain Heart Kidney Muscle
ENSDART00000115121 0.147±0.12 0.059±0.00 0.287±0.23 0.061±0.00
ENSDART00000134185 N/A 0.318±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004867 IEA serine-type endopeptidase inhibitor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000215018 COL28A1 collagen, type XXVIII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000068794 Col28a1 collagen, type XXVIII, alpha 1 protein_coding Mus_musculus

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