C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Aa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077103 sema4aa 7955 - 16:45885728-45903216 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000114601 sema4aa-201 45885728-45903158 protein_coding
  ENSDART00000149431 sema4aa-001 45886024-45903216 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000114601ENSDART00000149431
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000114601 0.382±0.04 1.310±0.67 8.382±0.00 N/A 1.520±0.00
ENSDART00000149431 0.202±0.00 0.904±0.00 N/A 0.068±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0007275 IEA multicellular organismal development
GO:0010842 IMP retina layer formation
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196189 SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein_coding Homo_sapiens
ENSMUSG00000028064 Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A protein_coding Mus_musculus

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