C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type VI, alpha 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077139 col6a3 7955 - 9:24947662-24978784 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000113176 col6a3-201 24948410-24978784 protein_coding
  ENSDART00000133706 col6a3-005 24948056-24950464 retained_intron
  ENSDART00000135769 col6a3-004 24949704-24956123 protein_coding
  ENSDART00000138402 col6a3-003 24948286-24950197 retained_intron
  ENSDART00000138754 col6a3-001 24947662-24977815 protein_coding
  ENSDART00000145734 col6a3-002 24948162-24955356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000138754ENSDART00000145734
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000138754 0.491±0.22 4.226±3.11 3.395±0.00 0.061±0.00 1.334±0.00
ENSDART00000145734 1.321±0.02 14.993±0.00 N/A N/A 8.102±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004867 IEA serine-type endopeptidase inhibitor activity
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163359 COL6A3 collagen, type VI, alpha 3 protein_coding Homo_sapiens
ENSMUSG00000048126 Col6a3 collagen, type VI, alpha 3 protein_coding Mus_musculus

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