C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptopodin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077157 SYNPO2 (1 of 2) 7955 - 1:24843964-24848670 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111550 SYNPO2 (1 of 2)-201 24844881-24846752 protein_coding
  ENSDART00000134192 SYNPO2 (1 of 2)-002 24846282-24848670 protein_coding
  ENSDART00000137869 SYNPO2 (1 of 2)-001 24843964-24848656 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000111550ENSDART00000134192ENSDART00000137869
Transcript ID Brain Heart Kidney Muscle
ENSDART00000111550 0.083±0.02 N/A N/A N/A
ENSDART00000134192 0.076±0.00 N/A N/A N/A
ENSDART00000137869 0.083±0.04 0.033±0.00 1.141±0.24 9.557±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005O CIL_00005O_0002 CGP 1:24774991-24848670

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172403 SYNPO2 synaptopodin 2 protein_coding Homo_sapiens
ENSMUSG00000050315 Synpo2 synaptopodin 2 protein_coding Mus_musculus

Loading