C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type VIII, alpha 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000077403 col8a1a 7955 + 9:31123964-31136086 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102981 col8a1a-001 31123964-31136086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSDART00000102981
Transcript ID Brain Heart
ENSDART00000102981 0.051±0.01 0.232±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059H CIL_00059H_0001 CGP 9:31046975-31136086

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005581 IEA collagen
GO:0014028 IMP notochord formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144810 COL8A1 collagen, type VIII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000068196 Col8a1 collagen, type VIII, alpha 1 protein_coding Mus_musculus

Loading