C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphodiesterase 6C, cGMP-specific, cone, alpha prime
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000078461 pde6c 7955 - 12:5703896-5728750 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000106501 pde6c-001 5703896-5728750 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000106501
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000106501 0.270±0.12 0.039±0.02 0.484±0.21 0.010±0.00 0.046±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction
GO:0008081 IEA phosphoric diester hydrolase activity
GO:0016787 IEA hydrolase activity
GO:0045494 IMP photoreceptor cell maintenance
GO:0046872 IEA metal ion binding
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000095464 PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime protein_coding Homo_sapiens
ENSMUSG00000024992 Pde6c phosphodiesterase 6C, cGMP specific, cone, alpha prime protein_coding Mus_musculus

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