C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XVII, alpha 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000079011 col17a1b 7955 + 13:24976134-25004032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000021053 col17a1b-201 24976134-25004032 protein_coding
  ENSDART00000134102 col17a1b-001 24978939-25003582 protein_coding
  ENSDART00000137074 col17a1b-002 24980376-24986119 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000021053ENSDART00000134102
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000021053 0.591±0.40 0.470±0.23 1.241±0.00 0.013±0.00 0.100±0.00
ENSDART00000134102 0.089±0.04 2.366±0.00 7.882±0.07 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000065618 COL17A1 collagen, type XVII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000025064 Col17a1 collagen, type XVII, alpha 1 protein_coding Mus_musculus

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