C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: high-mobility group box 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000079772 hmgb1a 7955 - 10:37242189-37246980 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111964 hmgb1a-201 37242189-37246980 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000111964
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000111964 277.840±85.21 154.835±62.63 106.597±8.20 3.472±0.00 45.648±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005886 IDA plasma membrane
GO:0009409 IDA response to cold
GO:0030900 IMP forebrain development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189403 HMGB1 high mobility group box 1 protein_coding Homo_sapiens
ENSMUSG00000066551 Hmgb1 high mobility group box 1 protein_coding Mus_musculus

Loading