C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PRP3 pre-mRNA processing factor 3 homolog (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000086425 prpf3 7955 - 16:10761127-10780980 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000081288 prpf3-204 10761135-10780945 protein_coding
  ENSDART00000126154 prpf3-001 10761127-10780980 protein_coding
  ENSDART00000136522 prpf3-002 10774309-10777101 protein_coding
  ENSDART00000141696 prpf3-003 10768410-10769392 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000081288ENSDART00000126154
Transcript ID Brain Heart Kidney Muscle
ENSDART00000081288 N/A 0.394±0.00 N/A N/A
ENSDART00000126154 0.481±0.25 2.689±2.29 4.398±2.89 0.216±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IEA mRNA splicing, via spliceosome
GO:0006397 IEA mRNA processing
GO:0046540 IEA U4/U6 x U5 tri-snRNP complex
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117360 PRPF3 pre-mRNA processing factor 3 protein_coding Homo_sapiens
ENSMUSG00000015748 Prpf3 PRP3 pre-mRNA processing factor 3 homolog (yeast) protein_coding Mus_musculus

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