C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) binding protein, nuclear 1, like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000087996 pabpn1l 7955 - 7:56900155-56911722 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000125275 pabpn1l-201 56900155-56910332 protein_coding
  ENSDART00000131923 pabpn1l-001 56900642-56911722 protein_coding
  ENSDART00000135304 pabpn1l-003 56900882-56911657 protein_coding
  ENSDART00000147792 pabpn1l-002 56900943-56911599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000125275ENSDART00000131923ENSDART00000147792
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000125275 1.670±0.79 1.550±1.06 6.213±1.94 0.089±0.00 4.581±0.00
ENSDART00000131923 N/A N/A 31.866±11.44 0.624±0.00 N/A
ENSDART00000147792 N/A N/A N/A 0.203±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AK CIL_0006AK_0001 CGP 7:56900155-56938884

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000205022 PABPN1L poly(A) binding protein, nuclear 1-like (cytoplasmic) protein_coding Homo_sapiens
ENSMUSG00000069867 Pabpn1l poly(A)binding protein nuclear 1-like protein_coding Mus_musculus

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