C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 27 (VPS9 domain)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000089207 ANKRD27 7955 + 25:37441656-37465286 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000124347 ANKRD27-201 37448259-37465286 protein_coding
  ENSDART00000152519 ANKRD27-002 37455412-37458580 retained_intron
  ENSDART00000152801 ANKRD27-001 37441656-37465238 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000124347ENSDART00000152519ENSDART00000152801
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000124347 2.440±0.00 2.263±0.40 N/A N/A 1.307±0.00
ENSDART00000152519 N/A 1.560±0.00 N/A N/A N/A
ENSDART00000152801 2.973±2.60 3.169±0.11 4.902±0.00 0.186±0.00 0.656±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0004 UCNEbase 25:37216824-37485434

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000105186 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) protein_coding Homo_sapiens
ENSMUSG00000034867 Ankrd27 ankyrin repeat domain 27 (VPS9 domain) protein_coding Mus_musculus

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