C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 27 (VPS9 domain)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105186 ANKRD27 9606 - 19:32597007-32676597 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306065 ANKRD27-001 32597007-32675199 protein_coding
  ENST00000586463 ANKRD27-003 32643123-32675187 protein_coding
  ENST00000586693 ANKRD27-011 32644397-32675147 protein_coding
  ENST00000587352 ANKRD27-002 32637300-32675169 protein_coding
  ENST00000587667 ANKRD27-006 32598328-32600286 retained_intron
  ENST00000588700 ANKRD27-004 32643127-32675192 nonsense_mediated_decay
  ENST00000590519 ANKRD27-010 32646604-32676597 protein_coding
  ENST00000591100 ANKRD27-009 32626807-32643300 protein_coding
  ENST00000593232 ANKRD27-008 32643063-32643785 retained_intron
  ENST00000622502 ANKRD27-201 32637300-32675169 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306065ENST00000588700ENST00000622502
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306065 0.886±0.00 3.207±0.00 1.143±0.00 2.280±0.36 2.207±0.33 5.102±1.93 2.466±1.22 7.060±0.00 3.443±2.11 4.089±0.00 11.015±0.00 6.040±1.87 4.925±2.06 5.875±0.96
ENST00000588700 N/A N/A 2.128±0.00 3.498±0.00 3.831±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622502 N/A N/A 0.538±0.00 N/A N/A 1.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IDA guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005764 IDA lysosome
GO:0005769 IDA early endosome
GO:0016020 IDA membrane
GO:0043547 IEA positive regulation of GTPase activity
GO:0045022 IDA early endosome to late endosome transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089207 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) protein_coding Danio_rerio
ENSMUSG00000034867 Ankrd27 ankyrin repeat domain 27 (VPS9 domain) protein_coding Mus_musculus

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