C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat domain 27 (VPS9 domain)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034867 Ankrd27 10090 + 7:35586244-35639226 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040844 Ankrd27-001 35586244-35639226 protein_coding
  ENSMUST00000186245 Ankrd27-002 35586250-35609114 protein_coding
  ENSMUST00000187567 Ankrd27-005 35612150-35615044 retained_intron
  ENSMUST00000187807 Ankrd27-006 35615948-35628449 protein_coding
  ENSMUST00000188906 Ankrd27-004 35586250-35601628 protein_coding
  ENSMUST00000190503 Ankrd27-003 35586277-35639226 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040844ENSMUST00000186245ENSMUST00000187807ENSMUST00000190503
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040844 8.233±1.58 3.539±1.49 9.864±0.40 5.065±0.61 5.857±1.48 5.745±1.65 2.117±0.64 3.753±0.59 6.764±3.05 6.723±1.30 2.443±0.49 6.869±1.96 4.904±2.03 3.265±0.86
ENSMUST00000186245 N/A N/A N/A 3.375±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.023±0.00 1.827±0.37
ENSMUST00000187807 N/A 6.802±0.29 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.206±0.22 N/A 3.888±0.00
ENSMUST00000190503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.898±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005769 IEA early endosome
GO:0016020 IEA membrane
GO:0043547 IEA positive regulation of GTPase activity
GO:0045022 IEA early endosome to late endosome transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089207 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) protein_coding Danio_rerio
ENSG00000105186 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) protein_coding Homo_sapiens

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