C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin 18a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000089805 pcdh18a 7955 - 1:12145910-12155872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000127838 pcdh18a-201 12145910-12155872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000127838
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000127838 5.579±1.57 0.746±0.19 0.394±0.09 0.097±0.00 2.364±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016339 IMP calcium-dependent cell-cell adhesion
GO:0042074 IMP cell migration involved in gastrulation
GO:0055113 IMP epiboly involved in gastrulation with mouth forming second

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189184 PCDH18 protocadherin 18 protein_coding Homo_sapiens
ENSMUSG00000037892 Pcdh18 protocadherin 18 protein_coding Mus_musculus

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