C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAD52 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000002016 RAD52 9606 - 12:912077-990053 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000228345 RAD52-014 912155-933076 retained_intron
  ENST00000358495 RAD52-001 912077-949722 protein_coding
  ENST00000397230 RAD52-007 929772-949519 protein_coding
  ENST00000430095 RAD52-008 912545-990053 protein_coding
  ENST00000461568 RAD52-002 913894-949665 nonsense_mediated_decay
  ENST00000463750 RAD52-004 913894-949665 retained_intron
  ENST00000468231 RAD52-003 912489-949641 nonsense_mediated_decay
  ENST00000481052 RAD52-005 912495-949626 retained_intron
  ENST00000488642 RAD52-006 912758-949682 retained_intron
  ENST00000535376 RAD52-016 913234-916582 processed_transcript
  ENST00000536177 RAD52-017 916206-949667 protein_coding
  ENST00000539046 RAD52-201 913893-949665 protein_coding
  ENST00000541619 RAD52-013 929937-949673 protein_coding
  ENST00000542297 RAD52-015 913359-914198 processed_transcript
  ENST00000542584 RAD52-010 916705-949669 processed_transcript
  ENST00000542785 RAD52-018 927223-949628 protein_coding
  ENST00000543912 RAD52-009 913892-949665 nonsense_mediated_decay
  ENST00000544742 RAD52-012 929930-949649 protein_coding
  ENST00000545564 RAD52-202 925463-933058 protein_coding
  ENST00000545967 RAD52-011 926849-949642 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000358495
Transcript ID Ovary
ENST00000358495 3.564±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TY CIL_0007TY_0001 VISTA 12:564896-1165613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 TAS double-strand break repair via homologous recombination
GO:0000730 TAS DNA recombinase assembly
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0006281 TAS:IEA DNA repair
GO:0006302 TAS double-strand break repair
GO:0006310 IMP:IEA DNA recombination
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005274 rad52 RAD52 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000030166 Rad52 RAD52 homolog (S. cerevisiae) protein_coding Mus_musculus

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