C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD38 molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000004468 CD38 9606 + 4:15778275-15853230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000226279 CD38-001 15778278-15853230 protein_coding
  ENST00000502843 CD38-002 15778275-15849255 nonsense_mediated_decay
  ENST00000506191 CD38-004 15778298-15816754 retained_intron
  ENST00000510674 CD38-005 15816596-15840490 protein_coding
  ENST00000511430 CD38-003 15778312-15826086 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000226279ENST00000502843ENST00000506191ENST00000510674ENST00000511430
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000226279 0.776±0.00 1.772±0.00 N/A 0.933±0.17 0.689±0.37 0.872±0.00 0.836±0.73 0.373±0.00 0.644±0.00 1.010±0.27 1.047±0.71 0.277±0.06 0.246±0.11 N/A
ENST00000502843 N/A N/A 0.347±0.00 N/A 2.245±0.00 1.265±0.00 0.453±0.00 0.896±0.72 0.585±0.00 1.372±0.00 1.967±0.00 0.419±0.11 N/A 0.312±0.00
ENST00000506191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00 N/A
ENST00000510674 N/A N/A N/A N/A N/A 2.919±0.00 N/A N/A 1.993±0.00 N/A 18.478±0.00 N/A N/A N/A
ENST00000511430 N/A N/A N/A N/A 1.158±0.00 N/A N/A 0.533±0.00 0.143±0.00 N/A N/A 0.184±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026Q CIL_00026Q_0001 CGP 4:15702950-15853230
CIL_0005WP CIL_0005WP_0001 CGP 4:15778275-15938740

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0003953 IEA NAD+ nucleosidase activity
GO:0005634 IEA nucleus
GO:0005886 IEA plasma membrane
GO:0007165 NAS signal transduction
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007565 IEA female pregnancy
GO:0008152 IEA metabolic process
GO:0009725 IEA response to hormone
GO:0009986 IEA cell surface
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016740 IEA transferase activity
GO:0016798 IEA hydrolase activity, acting on glycosyl bonds
GO:0016849 IEA phosphorus-oxygen lyase activity
GO:0030307 IEA positive regulation of cell growth
GO:0030890 IMP positive regulation of B cell proliferation
GO:0032024 IEA positive regulation of insulin secretion
GO:0032355 IEA response to estradiol
GO:0032526 IEA response to retinoic acid
GO:0032570 IEA response to progesterone
GO:0033194 IEA response to hydroperoxide
GO:0034097 IEA response to cytokine
GO:0042493 IMP response to drug
GO:0043066 IMP negative regulation of apoptotic process
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045779 IEA negative regulation of bone resorption
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0045907 IEA positive regulation of vasoconstriction
GO:0050135 IEA NAD(P)+ nucleosidase activity
GO:0050853 IMP B cell receptor signaling pathway
GO:0060292 IEA long term synaptic depression
GO:0070062 IDA extracellular vesicular exosome
GO:0070555 IEA response to interleukin-1
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086451 CR318624.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000029084 Cd38 CD38 antigen protein_coding Mus_musculus

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