C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005WP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000004468-ENSG00000137440 CGP 9606 4:15778275-15938740
GeneTranscriptPositionBiotype
ENSG00000004468 (CD38)
CD38 molecule 		ENST00000226279 (CD38-001) 15778278-15853230 protein_coding
ENST00000502843 (CD38-002) 15778275-15849255 nonsense_mediated_decay
ENST00000506191 (CD38-004) 15778298-15816754 retained_intron
ENST00000510674 (CD38-005) 15816596-15840490 protein_coding
ENST00000511430 (CD38-003) 15778312-15826086 retained_intron
ENSG00000137440 (FGFBP1)
fibroblast growth factor binding protein 1 		ENST00000382333 (FGFBP1-001) 15935569-15938740 protein_coding
ENSG00000251644 (RP11-442P12.1)
 ENST00000509498 (RP11-442P12.1-001) 15864938-15865940 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005WP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029084-ENSMUSG00000048373 CGP 10090 5:43868809-43981762
GeneTranscriptPositionBiotype
ENSMUSG00000029084 (Cd38)
CD38 antigen 		ENSMUST00000030964 (Cd38-001) 43868809-43912375 protein_coding
ENSMUSG00000033036 (Gm7879)
predicted pseudogene 7879 		ENSMUST00000122204 (Gm7879-001) 43913173-43913706 processed_pseudogene
ENSMUSG00000048373 (Fgfbp1)
fibroblast growth factor binding protein 1 		ENSMUST00000061299 (Fgfbp1-201) 43978865-43981762 protein_coding
ENSMUSG00000059565 (Gm5292)
predicted gene 5292 		ENSMUST00000073317 (Gm5292-001) 43943902-43944483 processed_pseudogene
ENSMUSG00000086479 (Gm16014)
predicted gene 16014 		ENSMUST00000123363 (Gm16014-001) 43876036-43877304 sense_intronic
ENSMUSG00000087281 (Gm16015)
predicted gene 16015 		ENSMUST00000154897 (Gm16015-001) 43909215-43909885 antisense
ENSMUSG00000093859 (Gm7882)
predicted gene 7882 		ENSMUST00000177915 (Gm7882-201) 43917320-43918222 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WP_0001ENSG00000004468ENST00000226279ENST00000502843ENST00000506191ENST00000510674ENST00000511430ENSG00000137440ENST00000382333ENSG00000251644ENST00000509498CIL_0005WP_0002ENSMUSG00000029084ENSMUST00000030964ENSMUSG00000033036ENSMUST00000122204ENSMUSG00000048373ENSMUST00000061299ENSMUSG00000059565ENSMUST00000073317ENSMUSG00000086479ENSMUST00000123363ENSMUSG00000087281ENSMUST00000154897ENSMUSG00000093859ENSMUST00000177915
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WP_0001ENSG00000004468ENST00000226279ENST00000502843ENST00000506191ENST00000510674ENST00000511430ENSG00000137440ENST00000382333ENSG00000251644ENST00000509498CIL_0005WP_0002ENSMUSG00000029084ENSMUST00000030964ENSMUSG00000033036ENSMUST00000122204ENSMUSG00000048373ENSMUST00000061299ENSMUSG00000059565ENSMUST00000073317ENSMUSG00000086479ENSMUST00000123363ENSMUSG00000087281ENSMUST00000154897ENSMUSG00000093859ENSMUST00000177915
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000004468 ENST00000226279 0.776±0.00 1.772±0.00 N/A 0.933±0.17 0.689±0.37 0.872±0.00 0.836±0.73 0.373±0.00 0.644±0.00 1.010±0.27 1.047±0.71 0.277±0.06 0.246±0.11 N/A
ENST00000502843 N/A N/A 0.347±0.00 N/A 2.245±0.00 1.265±0.00 0.453±0.00 0.896±0.72 0.585±0.00 1.372±0.00 1.967±0.00 0.419±0.11 N/A 0.312±0.00
ENST00000506191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00 N/A
ENST00000510674 N/A N/A N/A N/A N/A 2.919±0.00 N/A N/A 1.993±0.00 N/A 18.478±0.00 N/A N/A N/A
ENST00000511430 N/A N/A N/A N/A 1.158±0.00 N/A N/A 0.533±0.00 0.143±0.00 N/A N/A 0.184±0.00 N/A N/A
ENSG00000137440 ENST00000382333 N/A 0.034±0.00 N/A N/A 0.985±0.00 1.900±1.66 N/A 0.279±0.00 N/A 1.782±1.65 0.195±0.00 4.011±4.43 0.616±0.36 0.020±0.00
ENSG00000251644 ENST00000509498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029084 ENSMUST00000030964 9.131±1.62 4.421±1.02 4.958±0.24 0.557±0.26 10.056±2.98 57.289±11.53 6.011±0.93 4.654±0.63 5.762±2.17 21.075±0.68 1.928±0.23 4.547±1.78 1.889±0.92 0.265±0.10
ENSMUSG00000033036 ENSMUST00000122204 N/A N/A 0.108±0.00 0.452±0.09 N/A 0.235±0.00 N/A 0.150±0.05 0.745±0.56 N/A N/A N/A 0.186±0.21 0.148±0.06
ENSMUSG00000048373 ENSMUST00000061299 0.059±0.00 N/A 0.017±0.00 1.414±0.60 0.802±0.52 32.261±2.31 0.107±0.06 2.397±0.39 2.159±3.30 9.481±1.47 1.787±0.75 0.074±0.04 15.272±17.12 N/A
ENSMUSG00000059565 ENSMUST00000073317 0.229±0.05 0.160±0.00 0.068±0.01 0.044±0.03 0.164±0.00 0.372±0.32 0.077±0.00 0.078±0.00 0.032±0.02 0.089±0.00 N/A 0.395±0.35 0.137±0.09 N/A
ENSMUSG00000086479 ENSMUST00000123363 N/A N/A 0.020±0.00 N/A N/A 0.233±0.03 0.071±0.00 0.189±0.00 N/A 0.224±0.07 N/A 0.324±0.00 0.014±0.00 N/A
ENSMUSG00000087281 ENSMUST00000154897 0.277±0.10 0.449±0.14 0.196±0.00 N/A 0.193±0.00 0.990±0.35 0.137±0.00 0.237±0.10 0.260±0.21 0.220±0.00 0.194±0.02 0.493±0.27 0.423±0.34 5.761±1.31
ENSMUSG00000093859 ENSMUST00000177915 N/A N/A N/A N/A 0.094±0.00 0.091±0.00 N/A N/A 0.008±0.00 N/A N/A N/A N/A 0.193±0.09

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