C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: male-specific lethal 3 homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000005302 MSL3 9606 + X:11758159-11775753 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312196 MSL3-009 11758159-11775753 protein_coding
  ENST00000337339 MSL3-001 11758237-11767977 protein_coding
  ENST00000361672 MSL3-201 11758159-11775747 protein_coding
  ENST00000380691 MSL3-006 11762888-11768684 nonsense_mediated_decay
  ENST00000380692 MSL3-004 11759628-11765646 protein_coding
  ENST00000380693 MSL3-010 11759552-11775751 protein_coding
  ENST00000398527 MSL3-202 11758582-11775747 protein_coding
  ENST00000421368 MSL3-003 11758586-11762957 protein_coding
  ENST00000467141 MSL3-008 11765661-11769102 processed_transcript
  ENST00000468149 MSL3-012 11758253-11775231 nonsense_mediated_decay
  ENST00000473380 MSL3-002 11768313-11772218 retained_intron
  ENST00000473806 MSL3-005 11760138-11761582 processed_transcript
  ENST00000476743 MSL3-013 11758582-11762219 protein_coding
  ENST00000478462 MSL3-014 11759641-11761054 retained_intron
  ENST00000482871 MSL3-015 11760043-11762907 retained_intron
  ENST00000483645 MSL3-016 11760186-11762924 processed_transcript
  ENST00000494268 MSL3-011 11760222-11764251 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312196ENST00000337339ENST00000361672ENST00000380692ENST00000380693ENST00000398527ENST00000421368ENST00000468149ENST00000473380ENST00000476743ENST00000478462ENST00000482871ENST00000483645ENST00000494268
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312196 2.597±0.00 N/A N/A 3.973±1.89 3.656±0.00 1.403±0.18 3.072±0.00 1.876±1.36 N/A N/A 7.223±0.00 3.029±1.52 3.251±1.20 5.128±0.71
ENST00000337339 0.747±0.00 N/A N/A 1.087±0.00 0.823±0.09 N/A 0.465±0.00 0.578±0.00 0.310±0.02 0.959±0.20 N/A 1.464±1.21 1.168±0.23 2.494±0.00
ENST00000361672 N/A 2.965±0.00 N/A N/A 1.040±0.00 N/A N/A 2.216±0.00 1.177±0.00 N/A N/A N/A 1.124±0.00 4.965±0.00
ENST00000380692 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.391±0.00 N/A 0.569±0.00 N/A N/A
ENST00000380693 2.298±0.00 N/A 0.497±0.00 1.227±0.00 1.388±0.02 1.683±0.00 0.107±0.00 0.871±0.00 0.717±0.37 1.597±0.00 N/A 3.572±0.00 1.288±0.00 N/A
ENST00000398527 N/A N/A N/A N/A N/A 4.734±0.00 N/A N/A 1.423±0.00 5.485±0.00 N/A N/A N/A 8.178±0.00
ENST00000421368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.566±0.00 7.661±0.00
ENST00000468149 N/A N/A 0.339±0.00 N/A N/A N/A 1.055±0.00 N/A N/A N/A 2.506±0.00 N/A N/A N/A
ENST00000473380 N/A N/A N/A N/A N/A 6.669±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476743 N/A N/A N/A N/A N/A N/A N/A N/A 4.174±0.00 N/A N/A 5.747±0.00 8.202±0.00 8.425±0.00
ENST00000478462 N/A N/A 1.086±0.00 N/A 3.713±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482871 N/A N/A N/A 2.326±0.00 N/A N/A N/A N/A 1.404±0.00 N/A N/A N/A N/A N/A
ENST00000483645 N/A N/A 0.713±0.00 N/A N/A N/A N/A 1.119±0.00 N/A N/A N/A N/A N/A N/A
ENST00000494268 N/A N/A N/A N/A 1.573±0.00 N/A N/A N/A N/A 1.338±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007275 TAS multicellular organismal development
GO:0035064 IDA methylated histone binding
GO:0043984 IDA histone H4-K16 acetylation
GO:0072487 IDA MSL complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031358 Msl3 male-specific lethal 3 homolog (Drosophila) protein_coding Mus_musculus
ENSMUSG00000047669 Msl3l2 male-specific lethal 3-like 2 (Drosophila) protein_coding Mus_musculus

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