C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 3 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337339 MSL3-001 ENSG00000005302 9606 + X:11758237-11767977 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000337339
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000337339 0.747±0.00 1.087±0.00 0.823±0.09 0.465±0.00 0.578±0.00 0.310±0.02 0.959±0.20 1.464±1.21 1.168±0.23 2.494±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007275 TAS multicellular organismal development
GO:0035064 IDA methylated histone binding
GO:0043984 IDA histone H4-K16 acetylation
GO:0072487 IDA MSL complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033725 Msl3-001 protein_coding Mus_musculus 0 1277
ENSMUST00000129860 Msl3-003 retained_intron Mus_musculus 0 1061
ENSMUST00000112137 Msl3-002 protein_coding Mus_musculus 0 952

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