C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 3 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000312196 MSL3-009 ENSG00000005302 9606 + X:11758159-11775753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000312196
Transcript ID Adipose Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000312196 2.597±0.00 3.973±1.89 3.656±0.00 1.403±0.18 3.072±0.00 1.876±1.36 7.223±0.00 3.029±1.52 3.251±1.20 5.128±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:TAS nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007275 TAS multicellular organismal development
GO:0035064 IDA methylated histone binding
GO:0043984 IDA histone H4-K16 acetylation
GO:0072487 IDA MSL complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033725 Msl3-001 protein_coding Mus_musculus 0 1893
ENSMUST00000112137 Msl3-002 protein_coding Mus_musculus 0 1513
ENSMUST00000129860 Msl3-003 retained_intron Mus_musculus 0 1227
ENSMUST00000145564 Msl3-004 retained_intron Mus_musculus 0 429

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