C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 19 open reading frame 60
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000006015 C19orf60 9606 + 19:18588685-18592336 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358607 C19orf60-001 18588725-18592336 protein_coding
  ENST00000450195 C19orf60-002 18588796-18592336 protein_coding
  ENST00000595077 C19orf60-007 18589872-18592336 retained_intron
  ENST00000595490 C19orf60-005 18589602-18592336 protein_coding
  ENST00000597371 C19orf60-008 18588809-18592327 retained_intron
  ENST00000598375 C19orf60-004 18588685-18592334 retained_intron
  ENST00000600997 C19orf60-003 18588798-18592336 retained_intron
  ENST00000601736 C19orf60-006 18588802-18592336 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358607ENST00000450195ENST00000595077ENST00000597371ENST00000600997ENST00000601736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358607 15.242±0.00 18.822±0.00 0.895±0.00 10.251±5.53 9.584±7.85 9.653±8.65 3.860±3.49 11.258±7.00 7.225±6.65 7.640±6.87 7.822±2.37 10.298±6.71 18.256±5.14 5.602±0.00
ENST00000450195 N/A 8.642±0.00 0.636±0.00 5.426±1.43 9.166±0.00 2.925±2.25 7.726±7.01 2.511±0.00 7.458±4.91 8.017±6.77 14.208±1.16 8.581±5.19 12.805±1.33 5.746±2.07
ENST00000595077 N/A N/A 0.310±0.00 N/A N/A N/A 0.115±0.00 0.977±0.00 N/A 0.100±0.00 N/A 1.274±0.62 N/A 0.559±0.00
ENST00000597371 4.107±0.00 8.428±0.00 N/A 3.078±1.33 7.494±0.00 3.319±2.62 3.943±0.00 4.467±0.00 3.937±0.00 7.706±0.00 N/A 13.813±5.64 8.215±0.00 4.112±0.00
ENST00000600997 N/A 3.012±0.00 N/A 0.941±0.00 0.712±0.39 N/A N/A 1.563±0.00 N/A N/A N/A 1.097±0.08 N/A 0.883±0.00
ENST00000601736 N/A N/A N/A N/A N/A 0.465±0.00 0.430±0.00 N/A N/A N/A 8.009±0.00 N/A N/A 2.268±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NN CIL_0004NN_0002 CGP 19:18572220-18607741

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073867 C22H19orf60 chromosome 19 open reading frame 60 protein_coding Danio_rerio
ENSMUSG00000058833 2810428I15Rik RIKEN cDNA 2810428I15 gene protein_coding Mus_musculus

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