C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2810428I15 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058833 2810428I15Rik 10090 - 8:70504292-70506752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075175 2810428I15Rik-001 70504295-70506752 protein_coding
  ENSMUST00000128620 2810428I15Rik-003 70505851-70506713 retained_intron
  ENSMUST00000132107 2810428I15Rik-004 70505245-70506699 retained_intron
  ENSMUST00000133683 2810428I15Rik-005 70504295-70506426 processed_transcript
  ENSMUST00000135773 2810428I15Rik-002 70504292-70506721 retained_intron
  ENSMUST00000136913 2810428I15Rik-008 70504299-70506737 protein_coding
  ENSMUST00000138196 2810428I15Rik-006 70504398-70506108 retained_intron
  ENSMUST00000143598 2810428I15Rik-007 70504295-70506112 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075175ENSMUST00000128620ENSMUST00000132107ENSMUST00000133683ENSMUST00000135773ENSMUST00000136913ENSMUST00000138196
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075175 72.083±15.83 66.295±12.93 61.727±7.06 56.740±30.70 74.855±27.79 53.558±15.12 63.917±10.92 71.037±13.31 57.306±14.01 66.330±11.68 59.785±6.34 44.483±19.11 29.187±13.68 9.024±0.94
ENSMUST00000128620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.993±0.00
ENSMUST00000132107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.572±0.90 2.136±0.00 N/A
ENSMUST00000133683 45.047±14.31 N/A N/A N/A 39.246±4.25 N/A N/A 11.042±0.00 N/A N/A N/A 20.312±7.99 11.699±3.43 3.321±0.96
ENSMUST00000135773 N/A N/A N/A 12.632±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.854±0.00
ENSMUST00000136913 29.927±0.00 86.767±5.56 N/A N/A 54.473±12.23 31.389±9.85 N/A 24.452±6.27 N/A 27.156±0.00 N/A 73.075±20.56 N/A 2.279±0.42
ENSMUST00000138196 N/A N/A N/A 9.337±0.00 30.031±9.56 N/A N/A N/A N/A N/A N/A 15.738±2.66 10.384±3.49 14.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NN CIL_0004NN_0003 CGP 8:70493158-70506752

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073867 C22H19orf60 chromosome 19 open reading frame 60 protein_coding Danio_rerio
ENSG00000006015 C19orf60 chromosome 19 open reading frame 60 protein_coding Homo_sapiens

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